1887
Research article Open Access
Like 0

Abstract

represents a health concern for both humans and pigs. The characterisation of its subspecies is an important step improving the understanding of the epidemiology and the control of this pathogen. Ninety-two human strains were selected for a retrospective study. Subspecies determination by sequencing and IS/IS analysis showed that 98.9% of Belgian human strains belong to the subspecies (MAH). Some of these MAH strains present particular IS/IS profiles (absence of IS and false IS901 detection provoked by the presence of IS). In addition, 54 MAH strains isolated from submandibular lymph nodes of Belgian pigs with lymphadenitis were included in this study. Genotyping of human and porcine isolates was performed using multispacer sequence typing (MST). In total, 49 different MST types were identified among pig (n = 11) and human (n = 43) MA isolates, with only five shared by both hosts. Among these MST types, 34 were newly identified. Our findings demonstrate the extensive genetic diversity among MAH isolates. Some genotypes were more prevalent in human or pigs but no correlation was observed between MST type and place of residence or the farm of origin for human and porcine isolates respectively, suggesting an environmental source of infection.

Loading

Article metrics loading...

/content/10.2807/1560-7917.ES.2016.21.3.30111
2016-01-21
2024-04-19
http://instance.metastore.ingenta.com/content/10.2807/1560-7917.ES.2016.21.3.30111
Loading
Loading full text...

Full text loading...

/deliver/fulltext/eurosurveillance/21/3/eurosurv-21-30111-3.html?itemId=/content/10.2807/1560-7917.ES.2016.21.3.30111&mimeType=html&fmt=ahah

References

  1. Falkinham JO 3rd. Epidemiology of infection by nontuberculous mycobacteria. Clin Microbiol Rev. 1996;9(2):177-215. PMID: 8964035 
  2. Winthrop KL. Pulmonary disease due to nontuberculous mycobacteria: an epidemiologist’s view. Future Microbiol. 2010;5(3):343-5.  https://doi.org/10.2217/fmb.10.13  PMID: 20210543 
  3. Cook JL. Nontuberculous mycobacteria: opportunistic environmental pathogens for predisposed hosts. Br Med Bull. 2010;96(1):45-59.  https://doi.org/10.1093/bmb/ldq035  PMID: 20977990 
  4. van Ingen J, Wisselink HJ, van Solt-Smits CB, Boeree MJ, van Soolingen D. Isolation of mycobacteria other than Mycobacterium avium from porcine lymph nodes. Vet Microbiol. 2010;144(1-2):250-3.  https://doi.org/10.1016/j.vetmic.2009.12.047  PMID: 20097017 
  5. Thorel MF, Krichevsky M, Lévy-Frébault VV. Numerical taxonomy of mycobactin-dependent mycobacteria, emended description of Mycobacterium avium, and description of Mycobacterium avium subsp. avium subsp. nov., Mycobacterium avium subsp. paratuberculosis subsp. nov., and Mycobacterium avium subsp. silvaticum subsp. nov. Int J Syst Bacteriol. 1990;40(3):254-60.  https://doi.org/10.1099/00207713-40-3-254  PMID: 2397193 
  6. Mijs W, de Haas P, Rossau R, Van der Laan T, Rigouts L, Portaels F, et al. Molecular evidence to support a proposal to reserve the designation Mycobacterium avium subsp. avium for bird-type isolates and ‘M. avium subsp. hominissuis’ for the human/porcine type of M. avium. Int J Syst Evol Microbiol. 2002;52(Pt 5):1505-18. PMID: 12361252 
  7. Turenne CY, Wallace R Jr, Behr MA. Mycobacterium avium in the postgenomic era. Clin Microbiol Rev. 2007;20(2):205-29.  https://doi.org/10.1128/CMR.00036-06  PMID: 17428883 
  8. Turenne CY, Collins DM, Alexander DC, Behr MA. Mycobacterium avium subsp. paratuberculosis and M. avium subsp. avium are independently evolved pathogenic clones of a much broader group of M. avium organisms. J Bacteriol. 2008;190(7):2479-87.  https://doi.org/10.1128/JB.01691-07  PMID: 18245284 
  9. Harris NB, Barletta RG. Mycobacterium avium subsp. paratuberculosis in Veterinary Medicine. Clin Microbiol Rev. 2001;14(3):489-512.  https://doi.org/10.1128/CMR.14.3.489-512.2001  PMID: 11432810 
  10. Feller M, Huwiler K, Stephan R, Altpeter E, Shang A, Furrer H, et al. Mycobacterium avium subspecies paratuberculosis and Crohn’s disease: a systematic review and meta-analysis. Lancet Infect Dis. 2007;7(9):607-13.  https://doi.org/10.1016/S1473-3099(07)70211-6  PMID: 17714674 
  11. Ignatov D, Kondratieva E, Azhikina T, Apt A. Mycobacterium avium-triggered diseases: pathogenomics. Cell Microbiol. 2012;14(6):808-18.  https://doi.org/10.1111/j.1462-5822.2012.01776.x  PMID: 22348543 
  12. Álvarez J, Castellanos E, Romero B, Aranaz A, Bezos J, Rodríguez S, et al. Epidemiological investigation of a Mycobacterium avium subsp. hominissuis outbreak in swine. Epidemiol Infect. 2011;139(1):143-8.  https://doi.org/10.1017/S0950268810001779  PMID: 20653991 
  13. Despierres L, Cohen-Bacrie S, Richet H, Drancourt M. Diversity of Mycobacterium avium subsp. hominissuis mycobacteria causing lymphadenitis, France. Eur J Clin Microbiol Infect Dis. 2012;31(7):1373-9.  https://doi.org/10.1007/s10096-011-1452-2  PMID: 22042560 
  14. Pate M, Kušar D, Zolnir-Dovč M, Ocepek M. MIRU-VNTR typing of Mycobacterium avium in animals and humans: heterogeneity of Mycobacterium avium subsp. hominissuis versus homogeneity of Mycobacterium avium subsp. avium strains. Res Vet Sci. 2011;91(3):376-81.  https://doi.org/10.1016/j.rvsc.2010.10.001  PMID: 21047662 
  15. Iwamoto T, Nakajima C, Nishiuchi Y, Kato T, Yoshida S, Nakanishi N, et al. Genetic diversity of Mycobacterium avium subsp. hominissuis strains isolated from humans, pigs, and human living environment. Infect Genet Evol. 2012;12(4):846-52.  https://doi.org/10.1016/j.meegid.2011.06.018  PMID: 21745597 
  16. Muwonge A, Oloya J, Kankya C, Nielsen S, Godfroid J, Skjerve E, et al. Molecular characterization of Mycobacterium avium subspecies hominissuis isolated from humans, cattle and pigs in the Uganda cattle corridor using VNTR analysis. Infect Genet Evol. 2014;21:184-91.  https://doi.org/10.1016/j.meegid.2013.11.012  PMID: 24270015 
  17. Cvetnić Z, Spicić S, Benic M, Katalinić-Janković V, Pate M, Krt B, et al. Mycobacterial infection of pigs in Croatia. Acta Vet Hung. 2007;55(1):1-9.  https://doi.org/10.1556/AVet.55.2007.1.1  PMID: 17385551 
  18. Agdestein A, Johansen TB, Polaček V, Lium B, Holstad G, Vidanović D, et al. Investigation of an outbreak of mycobacteriosis in pigs. BMC Vet Res. 2011;7(1):63.  https://doi.org/10.1186/1746-6148-7-63  PMID: 22014189 
  19. Griffith DE, Aksamit T, Brown-Elliott BA, Catanzaro A, Daley C, Gordin F, et al. ATS Mycobacterial Diseases SubcommitteeAmerican Thoracic SocietyInfectious Disease Society of America. An official ATS/IDSA statement: diagnosis, treatment, and prevention of nontuberculous mycobacterial diseases. Am J Respir Crit Care Med. 2007;175(4):367-416.  https://doi.org/10.1164/rccm.200604-571ST  PMID: 17277290 
  20. Kirschner P, Springer B, Vogel U, Meier A, Wrede A, Kiekenbeck M, et al. Genotypic identification of mycobacteria by nucleic acid sequence determination: report of a 2-year experience in a clinical laboratory. J Clin Microbiol. 1993;31(11):2882-9. PMID: 7505291 
  21. Guerrero C, Bernasconi C, Burki D, Bodmer T, Telenti A. A novel insertion element from Mycobacterium avium, IS1245, is a specific target for analysis of strain relatedness. J Clin Microbiol. 1995;33(2):304-7. PMID: 7714183 
  22. Godfroid J, Delcorps C, Irenge LM, Walravens K, Marché S, Gala JL. Definitive differentiation between single and mixed mycobacterial infections in red deer (Cervus elaphus) by a combination of duplex amplification of p34 and f57 sequences and Hpy188I enzymatic restriction of duplex amplicons. J Clin Microbiol. 2005;43(9):4640-8.  https://doi.org/10.1128/JCM.43.9.4640-4648.2005  PMID: 16145120 
  23. Ben Salah I, Adékambi T, Raoult D, Drancourt M. rpoB sequence-based identification of Mycobacterium avium complex species. Microbiology. 2008;154(Pt 12):3715-23.  https://doi.org/10.1099/mic.0.2008/020164-0  PMID: 19047739 
  24. Turenne CY, Semret M, Cousins DV, Collins DM, Behr MA. Sequencing of hsp65 distinguishes among subsets of the Mycobacterium avium complex. J Clin Microbiol. 2006;44(2):433-40.  https://doi.org/10.1128/JCM.44.2.433-440.2006  PMID: 16455896 
  25. Dirac MA, Weigel KM, Yakrus MA, Becker AL, Chen HL, Fridley G, et al. Shared Mycobacterium avium genotypes observed among unlinked clinical and environmental isolates. Appl Environ Microbiol. 2013;79(18):5601-7.  https://doi.org/10.1128/AEM.01443-13  PMID: 23851084 
  26. Cayrou C, Turenne C, Behr MA, Drancourt M. Genotyping of Mycobacterium avium complex organisms using multispacer sequence typing. Microbiology. 2010;156(Pt 3):687-94.  https://doi.org/10.1099/mic.0.033522-0  PMID: 19926652 
  27. Méditerranée infection. URMS Database. MST Mycobacterium avium. Marseille: Méditerranée infection. [Accessed 9 May 2014]. Available from: http://www mediterranee-infection com/article php?laref=254&titre=mst-mycobacterium-avium
  28. Petrie A, Watson P. Additional techniques. In: Statistics for Veterinary and Animal Science. 2nd ed. Oxford: Blackwell Publishing; 2006. p. 191-211.
  29. Higgins J, Camp P, Farrell D, Bravo D, Pate M, Robbe-Austerman S. Identification of Mycobacterium spp. of veterinary importance using rpoB gene sequencing. BMC Vet Res. 2011;7(1):77.  https://doi.org/10.1186/1746-6148-7-77  PMID: 22118247 
  30. Uchiya K, Takahashi H, Yagi T, Moriyama M, Inagaki T, Ichikawa K, et al. Comparative genome analysis of Mycobacterium avium revealed genetic diversity in strains that cause pulmonary and disseminated disease. PLoS ONE. 2013;8(8):e71831.  https://doi.org/10.1371/journal.pone.0071831  PMID: 23990995 
  31. Beggs ML, Stevanova R, Eisenach KD. Species identification of Mycobacterium avium complex isolates by a variety of molecular techniques. J Clin Microbiol. 2000;38(2):508-12. PMID: 10655336 
  32. Ichikawa K, Yagi T, Moriyama M, Inagaki T, Nakagawa T, Uchiya K, et al. Characterization of Mycobacterium avium clinical isolates in Japan using subspecies-specific insertion sequences, and identification of a new insertion sequence, ISMav6. J Med Microbiol. 2009;58(Pt 7):945-50.  https://doi.org/10.1099/jmm.0.008623-0  PMID: 19502362 
  33. Bruijnesteijn van Coppenraet LE, de Haas PE, Lindeboom JA, Kuijper EJ, van Soolingen D. Lymphadenitis in children is caused by Mycobacterium avium hominissuis and not related to ‘bird tuberculosis’. Eur J Clin Microbiol Infect Dis. 2008;27(4):293-9.  https://doi.org/10.1007/s10096-007-0440-z  PMID: 18320245 
  34. European Food Safety Authority (EFSA). Technical specifications on harmonised epidemiological indicators for public health hazards to be covered by meat inspection of swine. EFSA Journal.2011;9(10):2371.
/content/10.2807/1560-7917.ES.2016.21.3.30111
Loading

Data & Media loading...

Submit comment
Close
Comment moderation successfully completed
This is a required field
Please enter a valid email address
Approval was a Success
Invalid data
An Error Occurred
Approval was partially successful, following selected items could not be processed due to error