1887
  1. Home
  2. Eurosurveillance
  3. Volume 23, Issue 28, 12/Jul/2018
  4. Article
Rapid communication Open Access
Like 0
Download

Abstract

An external quality assessment of yellow fever virus (YFV) molecular detection in European laboratories was organised in rapid response to an increase in human cases in Brazil in 2018 with risk of import to Europe. Detection of YFV was assessed among 32 laboratories in 23/31 European Union (EU) and European Economic Area (EEA) countries and two laboratories in one non-EU/EEA country. Adequate capabilities were lacking in 10/23 countries; five did not participate as they lacked implemented assays.

© Creative Commons License
This work is licensed under a Creative Commons Attribution 4.0 International License.
Loading

Article metrics loading...

/content/10.2807/1560-7917.ES.2018.23.28.1800341
2018-07-12
2018-09-20
http://instance.metastore.ingenta.com/content/10.2807/1560-7917.ES.2018.23.28.1800341
Loading
Loading full text...

Full text loading...

/deliver/fulltext/eurosurveillance/23/28/eurosurv-23-28-3.html?itemId=/content/10.2807/1560-7917.ES.2018.23.28.1800341&mimeType=html&fmt=ahah

References

  1. European Centre for Disease Prevention and Control (ECDC). Rapid Risk Assessment: Yellow fever among travellers returning from South America. Stockholm: ECDC; 2017. Available from: http://ecdc.europa.eu/en/publications/Publications/14-03-2017-RRA-Yellow%20fever,%20Flaviviridae-Suriname,%20Southern%20America.pdf
  2. ProMED-mail. YELLOW FEVER - NETHERLANDS: ex BRAZIL (SAO PAULO). Archive number. 20180115. 5561671. 15 Jan 2018. Available from: http://www.promedmail.org
  3. Gossner CM, Haussig JM, de Bellegarde de Saint Lary C, Kaasik Aaslav K, Schlagenhauf P, Sudre B. Increased risk of yellow fever infections among unvaccinated European travellers due to ongoing outbreak in Brazil, July 2017 to March 2018. Euro Surveill. 2018;23(11):1800106.  https://doi.org/10.2807/1560-7917.ES.2018.23.11.18-00106  PMID: 29560853 
  4. Domingo C, Patel P, Yillah J, Weidmann M, Méndez JA, Nakouné ER, et al. Advanced yellow fever virus genome detection in point-of-care facilities and reference laboratories. J Clin Microbiol. 2012;50(12):4054-60.  https://doi.org/10.1128/JCM.01799-12  PMID: 23052311 
  5. Patel P, Landt O, Kaiser M, Faye O, Koppe T, Lass U, et al. Development of one-step quantitative reverse transcription PCR for the rapid detection of flaviviruses. Virol J. 2013;10(1):58.  https://doi.org/10.1186/1743-422X-10-58  PMID: 23410000 
  6. Linke S, Ellerbrok H, Niedrig M, Nitsche A, Pauli G. Detection of West Nile virus lineages 1 and 2 by real-time PCR. J Virol Methods. 2007;146(1-2):355-8.  https://doi.org/10.1016/j.jviromet.2007.05.021  PMID: 17604132 
  7. Drosten C, Göttig S, Schilling S, Asper M, Panning M, Schmitz H, et al. Rapid detection and quantification of RNA of Ebola and Marburg viruses, Lassa virus, Crimean-Congo hemorrhagic fever virus, Rift Valley fever virus, dengue virus, and yellow fever virus by real-time reverse transcription-PCR. J Clin Microbiol. 2002;40(7):2323-30.  https://doi.org/10.1128/JCM.40.7.2323-2330.2002  PMID: 12089242 
  8. Bae HG, Nitsche A, Teichmann A, Biel SS, Niedrig M. Detection of yellow fever virus: a comparison of quantitative real-time PCR and plaque assay. J Virol Methods. 2003;110(2):185-91.  https://doi.org/10.1016/S0166-0934(03)00129-0  PMID: 12798247 
  9. Mantel N, Aguirre M, Gulia S, Girerd-Chambaz Y, Colombani S, Moste C, et al. Standardized quantitative RT-PCR assays for quantitation of yellow fever and chimeric yellow fever-dengue vaccines. J Virol Methods. 2008;151(1):40-6.  https://doi.org/10.1016/j.jviromet.2008.03.026  PMID: 18501437 
  10. Fernandes-Monteiro AG, Trindade GF, Yamamura AM, Moreira OC, de Paula VS, Duarte AC, et al. New approaches for the standardization and validation of a real-time qPCR assay using TaqMan probes for quantification of yellow fever virus on clinical samples with high quality parameters. Hum Vaccin Immunother. 2015;11(7):1865-71.  https://doi.org/10.4161/21645515.2014.990854  PMID: 26011746 
  11. Barbosa CM, Di Paola N, Cunha MP, Rodrigues-Jesus MJ, Araujo DB, Silveira VB, et al. Yellow Fever Virus RNA in Urine and Semen of Convalescent Patient, Brazil. Emerg Infect Dis. 2018;24(1):176-8.  https://doi.org/10.3201/eid2401.171310  PMID: 29058663 
  12. Wouthuyzen-Bakker M, Knoester M, van den Berg AP. GeurtsvanKessel CH, Koopmans MP, Van Leer-Buter C, et al. Yellow fever in a traveller returning from Suriname to the Netherlands, March 2017. Euro Surveill. 2017;22(11):30488.  https://doi.org/10.2807/1560-7917.ES.2017.22.11.30488  PMID: 28333617 
  13. Fischer C, Torres MC, Patel P, Moreira-Soto A, Gould EA, Charrel RN, et al. Lineage-Specific Real-Time RT-PCR for Yellow Fever Virus Outbreak Surveillance, Brazil. Emerg Infect Dis. 2017;23(11):1867-71.  https://doi.org/10.3201/eid2311.171131  PMID: 28949285 
  14. Weidmann M, Faye O, Faye O, Kranaster R, Marx A, Nunes MR, et al. Improved LNA probe-based assay for the detection of African and South American yellow fever virus strains. J Clin Virol. 2010;48(3):187-92.  https://doi.org/10.1016/j.jcv.2010.04.013  PMID: 20556888 
  15. Ayers M, Adachi D, Johnson G, Andonova M, Drebot M, Tellier R. A single tube RT-PCR assay for the detection of mosquito-borne flaviviruses. J Virol Methods. 2006;135(2):235-9.  https://doi.org/10.1016/j.jviromet.2006.03.009  PMID: 16650488 
  16. Moureau G, Temmam S, Gonzalez JP, Charrel RN, Grard G, de Lamballerie X. A real-time RT-PCR method for the universal detection and identification of flaviviruses. Vector Borne Zoonotic Dis. 2007;7(4):467-77.  https://doi.org/10.1089/vbz.2007.0206  PMID: 18020965 
  17. Patel P, Landt O, Kaiser M, Faye O, Koppe T, Lass U, et al. Development of one-step quantitative reverse transcription PCR for the rapid detection of flaviviruses. Virol J. 2013;10(1):58.  https://doi.org/10.1186/1743-422X-10-58  PMID: 23410000 
  18. Scaramozzino N, Crance JM, Jouan A, DeBriel DA, Stoll F, Garin D. Comparison of flavivirus universal primer pairs and development of a rapid, highly sensitive heminested reverse transcription-PCR assay for detection of flaviviruses targeted to a conserved region of the NS5 gene sequences. J Clin Microbiol. 2001;39(5):1922-7.  https://doi.org/10.1128/JCM.39.5.1922-1927.2001  PMID: 11326014 
  19. Brazilian Ministry of Health (IPFS). Monitoramento do Período Sazonal da Febre Amarela Brasil – 2017/2018; informe n° 26 | 2017/2018. [Monitoring of the Seasonal Period of Yellow Fever Brazil - 2017/2018; report n ° 26 | 2017/2018]. Brasilia: IPFS; 2018. (Brazilian). Available from: http://portalarquivos2.saude.gov.br/images/pdf/2018/maio/18/Informe-FA-26.pdf
  20. Brent SE, Watts A, Cetron M, German M, Kraemer MU, Bogoch II, et al. International travel between global urban centres vulnerable to yellow fever transmission. Bull World Health Organ. 2018;96(5):343-354B.  https://doi.org/10.2471/BLT.17.205658  PMID: 29875519 
  21. European Centre for Disease Prevention and Control (ECDC). Communicable disease threats report, week 22, 27 May-2 June 2018. Stockholm: ECDC; 2018 Available from: https://ecdc.europa.eu/sites/portal/files/documents/Communicable-disease-threats-report-2-june-2018.pdf
  22. European Centre for Disease Prevention and Control (ECDC). Exotic vectors: mosquito maps. Stockholm: ECDC; 2016. Available from: http://ecdc.europa.eu/en/healthtopics/vectors/vector-maps/Pages/VBORNET_maps.aspx
  23. Couto-Lima D, Madec Y, Bersot MI, Campos SS, Motta MA, Santos FBD, et al. Potential risk of re-emergence of urban transmission of Yellow Fever virus in Brazil facilitated by competent Aedes populations. Sci Rep. 2017;7(1):4848.  https://doi.org/10.1038/s41598-017-05186-3  PMID: 28687779 
  24. World Health Organization (WHO). Yellow fever – Brazil; Disease outbreak news 27 February 2018. Geneva: WHO; 2018.Available from: http://www.who.int/csr/don/27-february-2018-yellow-fever-brazil/en/
  25. Cleton N, Koopmans M, Reimerink J, Godeke GJ, Reusken C. Come fly with me: review of clinically important arboviruses for global travelers. J Clin Virol. 2012;55(3):191-203.  https://doi.org/10.1016/j.jcv.2012.07.004  PMID: 22840968 
  26. Reusken CBEM, Ieven M, Sigfrid L, Eckerle I, Koopmans M. Laboratory preparedness and response with a focus on arboviruses in Europe. Clin Microbiol Infect. 2018;24(3):221-8.  https://doi.org/10.1016/j.cmi.2017.12.010  PMID: 29274465 
Need for additional capacity and improved capability for molecular detection of yellow fever virus in European Expert Laboratories: External Quality Assessment, March 2018
<p class="citation"> <span>Citation style for this article:</span> <span class="meta-value authors"> <a href="/search?value1=Cristina+Domingo&option1=author&noRedirect=true" class="nonDisambigAuthorLink">Domingo Cristina</a>, <a href="/search?value1=Heinz+Ellerbrok&option1=author&noRedirect=true" class="nonDisambigAuthorLink">Ellerbrok Heinz</a>, <a href="/search?value1=Marion+Koopmans&option1=author&noRedirect=true" class="nonDisambigAuthorLink">Koopmans Marion</a>, <a href="/search?value1=Andreas+Nitsche&option1=author&noRedirect=true" class="nonDisambigAuthorLink">Nitsche Andreas</a>, <a href="/search?value1=Katrin+Leitmeyer&option1=author&noRedirect=true" class="nonDisambigAuthorLink">Leitmeyer Katrin</a>, <a href="/search?value1=R%C3%A9mi+N.+Charrel&option1=author&noRedirect=true" class="nonDisambigAuthorLink">Charrel Rémi N.</a>, <a href="/search?value1=Chantal+B.E.M.+Reusken&option1=author&noRedirect=true" class="nonDisambigAuthorLink">Reusken Chantal B.E.M.</a></span>. Need for additional capacity and improved capability for molecular detection of yellow fever virus in European Expert Laboratories: External Quality Assessment, March 2018. <a href="/content/ecdc">Euro Surveill.</a> 2018;23(28):pii=1800341. <a href="https://doi.org/10.2807/1560-7917.ES.2018.23.28.1800341" title="doi link" target="_blank">https://doi.org/10.2807/1560-7917.ES.2018.23.28.1800341</a> <span class="ES_Article_citation"> <span class="generated">Received</span>: 26 Jun 2018;&nbsp;&nbsp; <span class="generated">Accepted</span>: 12 Jul 2018 </span> </p>
/content/10.2807/1560-7917.ES.2018.23.28.1800341
/content/10.2807/1560-7917.ES.2018.23.28.1800341
Loading

Data & Media loading...

Supplementary data

  • Download

    • Table. Detailed overview results external quality assessment of yellow fever virus molecular detection.

    • Date:

Comment has been disabled for this content
Submit comment
Close
Comment moderation successfully completed
This is a required field
Please enter a valid email address
Approval was a Success
Invalid data
An Error Occurred
Approval was partially successful, following selected items could not be processed due to error