Introductions and early spread of SARS-CoV-2 in France, 24 January to 23 March 2020

Fabiana Gámbaro; Sylvie Behillil; Artem Baidaliuk; Flora Donati; Mélanie Albert; Andreea Alexandru; Maud Vanpeene; Méline Bizard; Angela Brisebarre; Marion Barbet; Fawzi Derrar; Sylvie van der Werf; Vincent Enouf; Etienne Simon-Loriere

doi:10.2807/1560-7917.ES.2020.25.26.2001200

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Introductions and early spread of SARS-CoV-2 in France, 24 January to 23 March 2020
Fabiana Gámbaro^1,2,3 , Sylvie Behillil^3,4,5 , Artem Baidaliuk^1,3 , Flora Donati^4,5 , Mélanie Albert^4,5 , Andreea Alexandru⁶ , Maud Vanpeene⁶ , Méline Bizard⁶ , Angela Brisebarre^4,5 , Marion Barbet^4,5 , Fawzi Derrar⁷ , Sylvie van der Werf^4,5,8 , Vincent Enouf^4,5,6,8 , Etienne Simon-Loriere^1,8
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Affiliations: ¹ Evolutionary genomics of RNA viruses, Institut Pasteur, Paris, France ² Université de Paris, Paris, France ³ These authors contributed equally ⁴ National Reference Center for Respiratory Viruses, Institut Pasteur, Paris, France ⁵ Molecular Genetics of RNA Viruses, CNRS - UMR 3569, University of Paris, Institut Pasteur, Paris, France ⁶ Mutualized Platform of Microbiology, Pasteur International Bioresources Network, Institut Pasteur, Paris, France ⁷ National Influenza Centre, Viral Respiratory Laboratory, Algiers, Algeria ⁸ These authors co-supervised this work

Correspondence:
Etienne Simon-Loriere
etienne.simon-loriere pasteur.fr

and Sylvie van der Werf
sylvie.van-der-werf pasteur.fr
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Citation style for this article: Gámbaro Fabiana, Behillil Sylvie, Baidaliuk Artem, Donati Flora, Albert Mélanie, Alexandru Andreea, Vanpeene Maud, Bizard Méline, Brisebarre Angela, Barbet Marion, Derrar Fawzi, van der Werf Sylvie, Enouf Vincent, Simon-Loriere Etienne. Introductions and early spread of SARS-CoV-2 in France, 24 January to 23 March 2020. Euro Surveill. 2020;25(26):pii=2001200. https://doi.org/10.2807/1560-7917.ES.2020.25.26.2001200 Received: 15 Jun 2020; Accepted: 02 Jul 2020

Abstract

Following SARS-CoV-2 emergence in China, a specific surveillance was implemented in France. Phylogenetic analysis of sequences retrieved through this surveillance suggests that detected initial introductions, involving non-clade G viruses, did not seed local transmission. Nevertheless, identification of clade G variants subsequently circulating in the country, with the earliest from a patient who neither travelled to risk areas nor had contact with travellers, suggests that SARS-CoV-2 might have been present before the first recorded local cases.

This work is licensed under a Creative Commons Attribution 4.0 International License.

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2020-07-02

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References

Zhu N, Zhang D, Wang W, Li X, Yang B, Song J, et al. , China Novel Coronavirus Investigating and Research Team. A novel coronavirus from patients with pneumonia in China, 2019. N Engl J Med. 2020;382(8):727-33. https://doi.org/10.1056/NEJMoa2001017 PMID: 31978945
Grubaugh ND, Ladner JT, Lemey P, Pybus OG, Rambaut A, Holmes EC, et al. Tracking virus outbreaks in the twenty-first century. Nat Microbiol. 2019;4(1):10-9. https://doi.org/10.1038/s41564-018-0296-2 PMID: 30546099
Bernard Stoecklin S, Rolland P, Silue Y, Mailles A, Campese C, Simondon A, et al. , Investigation Team. First cases of coronavirus disease 2019 (COVID-19) in France: surveillance, investigations and control measures, January 2020. Euro Surveill. 2020;25(6):2000094. https://doi.org/10.2807/1560-7917.ES.2020.25.6.2000094 PMID: 32070465
Guan WJ, Ni ZY, Hu Y, Liang WH, Ou CQ, He JX, et al. , China Medical Treatment Expert Group for Covid-19. Clinical characteristics of coronavirus disease 2019 in China. N Engl J Med. 2020;382(18):1708-20. https://doi.org/10.1056/NEJMoa2002032 PMID: 32109013
Li R, Pei S, Chen B, Song Y, Zhang T, Yang W, et al. Substantial undocumented infection facilitates the rapid dissemination of novel coronavirus (SARS-CoV-2). Science. 2020;368(6490):489-93. https://doi.org/10.1126/science.abb3221 PMID: 32179701
Lescure F-X, Bouadma L, Nguyen D, Parisey M, Wicky P-H, Behillil S, et al. Clinical and virological data of the first cases of COVID-19 in Europe: a case series. Lancet Infect Dis. 2020;20(6):697-706. https://doi.org/10.1016/S1473-3099(20)30200-0 PMID: 32224310
Gudbjartsson DF, Helgason A, Jonsson H, Magnusson OT, Melsted P, Norddahl GL, et al. Spread of SARS-CoV-2 in the Icelandic Population. N Engl J Med. 2020;382(24):2302-15. "https://doi.org/10.1056/NEJMoa2006100" https://doi.org/10.1056/NEJMoa2006100 PMID: 32289214
Zehender G, Lai A, Bergna A, Meroni L, Riva A, Balotta C, et al. Genomic characterization and phylogenetic analysis of SARS-COV-2 in Italy. J Med Virol. 2020. https://doi.org/10.1002/jmv.25794 PMID: 32222993
Gudbjartsson DF, Helgason A, Jonsson H, Magnusson OT, Melsted P, Norddahl GL, et al. Spread of SARS-CoV-2 in the Icelandic Population. N Engl J Med. 2020;382(24):2302-15. https://doi.org/10.1056/NEJMoa2006100 PMID: 32289214
Onder G, Rezza G, Brusaferro S. Case-Fatality Rate and Characteristics of Patients Dying in Relation to COVID-19 in Italy. JAMA. 2020. https://doi.org/10.1001/jama.2020.4683 PMID: 32203977

Introductions and early spread of SARS-CoV-2 in France, 24 January to 23 March 2020

Citation style for this article: <a href="/search?value1=Fabiana+G%C3%A1mbaro&option1=author&noRedirect=true" class="nonDisambigAuthorLink">Gámbaro Fabiana</a>, <a href="/search?value1=Sylvie+Behillil&option1=author&noRedirect=true" class="nonDisambigAuthorLink">Behillil Sylvie</a>, <a href="/search?value1=Artem+Baidaliuk&option1=author&noRedirect=true" class="nonDisambigAuthorLink">Baidaliuk Artem</a>, <a href="/search?value1=Flora+Donati&option1=author&noRedirect=true" class="nonDisambigAuthorLink">Donati Flora</a>, <a href="/search?value1=M%C3%A9lanie+Albert&option1=author&noRedirect=true" class="nonDisambigAuthorLink">Albert Mélanie</a>, <a href="/search?value1=Andreea+Alexandru&option1=author&noRedirect=true" class="nonDisambigAuthorLink">Alexandru Andreea</a>, <a href="/search?value1=Maud+Vanpeene&option1=author&noRedirect=true" class="nonDisambigAuthorLink">Vanpeene Maud</a>, <a href="/search?value1=M%C3%A9line+Bizard&option1=author&noRedirect=true" class="nonDisambigAuthorLink">Bizard Méline</a>, <a href="/search?value1=Angela+Brisebarre&option1=author&noRedirect=true" class="nonDisambigAuthorLink">Brisebarre Angela</a>, <a href="/search?value1=Marion+Barbet&option1=author&noRedirect=true" class="nonDisambigAuthorLink">Barbet Marion</a>, <a href="/search?value1=Fawzi+Derrar&option1=author&noRedirect=true" class="nonDisambigAuthorLink">Derrar Fawzi</a>, <a href="/search?value1=Sylvie+van+der+Werf&option1=author&noRedirect=true" class="nonDisambigAuthorLink">van der Werf Sylvie</a>, <a href="/search?value1=Vincent+Enouf&option1=author&noRedirect=true" class="nonDisambigAuthorLink">Enouf Vincent</a>, <a href="/search?value1=Etienne+Simon-Loriere&option1=author&noRedirect=true" class="nonDisambigAuthorLink">Simon-Loriere Etienne</a>. Introductions and early spread of SARS-CoV-2 in France, 24 January to 23 March 2020. <a href="/content/ecdc">Euro Surveill.</a> 2020;25(26):pii=2001200. <a href="https://doi.org/10.2807/1560-7917.ES.2020.25.26.2001200" title="doi link" target="_blank">https://doi.org/10.2807/1560-7917.ES.2020.25.26.2001200</a> Received: 15 Jun 2020;   Accepted: 02 Jul 2020

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Introductions and early spread of SARS-CoV-2 in France, 24 January to 23 March 2020

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